#include <iostream>
#include <time.h>
#include <dirent.h>
+#include <errno.h>
+#include <sys/stat.h>
+#include <fcntl.h>
+
+#include <boost/iostreams/filtering_streambuf.hpp>
+#include <boost/iostreams/stream.hpp>
+#include <boost/iostreams/filter/bzip2.hpp>
+#include <boost/iostreams/device/array.hpp>
+#include <boost/iostreams/copy.hpp>
#define HEADER_READOK 0
#define HEADER_READERR 1
#define HEADER_READLAST 2
+struct configcache::iobuffers
+{
+ boost::iostreams::filtering_ostreambuf *out;
+};
+
configcache::configcache(const string& cacheid, const int& nequi, const int& nskip, const string& datadir, char **configmem, const int& configMemSize, const int& cachemode,
ostream *_log){
log = _log;
+ dataReader = new datread(configMemSize, log);
+
NEQUI = nequi;
NSKIP = nskip;
DATADIR = datadir;
*configmem = configMem;
configSize = configMemSize;
- outBuffer = NULL;
- inBuffer = NULL;
+ ioBuffers = new iobuffers;
+ ioBuffers->out = NULL;
MODE = cachemode;
refetchDataFiles = false;
}
-string configcache::getFileId(int actnequi, const bool& shortid)
+string configcache::paraString() {
+ stringstream parastring;
+
+ for(int ipara=0; ipara<Paras.size(); ipara++)
+ parastring << "_" << Paras[ipara].id << Paras[ipara].val;
+
+ return parastring.str();
+}
+
+string configcache::getFileId(int actnequi, const bool& superextended, const bool& shortid)
{
stringstream fileid;
if(!shortid) fileid << CACHEID << "_" << actnequi << "_" << NSKIP;
- for(int ipara=0; ipara<Paras.size(); ipara++)
- fileid << "_" << Paras[ipara].id << Paras[ipara].val;
+
+ if( superextended )
+ fileid << "_" << hash( paraString() );
+ else
+ fileid << paraString();
return fileid.str();
}
string truncIn, truncOut;
filedesc->filename = infile;
- filedesc->doVirtualEquilibration = false;
- filedesc->firstUsedConfig = true;
if( infile.size() < 4 ) return false;
- if( infile.substr(infile.size()-4) == ".dat" )
+ if( infile.substr(infile.size()-4) == ".dat" ) {
filedesc->extended = false;
- else if( infile.substr(infile.size()-4) == "edat" )
+ filedesc->superextended = false;
+ }
+ else if( infile.substr(infile.size()-4) == "edat" ) {
filedesc->extended = true;
+ filedesc->superextended = false;
+ }
+ else if( infile.substr(infile.size()-4) == "sdat" ) {
+ filedesc->extended = true;
+ filedesc->superextended = true;
+ }
else
return false;
return false;
break;
case 2:
- if (atoi(inParts) < NEQUI)
- filedesc->doVirtualEquilibration = true;
filedesc->nequi = atoi(inParts);
break;
case 3:
delete[] inchar;
- if( truncIn.find( getFileId(NEQUI, true) + "_" ) == string::npos ) return false;
+ if( truncIn.find( getFileId(NEQUI, filedesc->superextended, true) + "_" ) == string::npos ) return false;
return true;
}
-int configcache::readHeader()
-{
- long unsigned int headersize;
-
- if( readDataToMem((char *)&headersize, sizeof(long unsigned int)) == sizeof(long unsigned int) && inFile.is_open() ) {
- if ( headersize == 0 )
- return HEADER_READLAST;
-
- pair<unsigned long, void *> newHeader;
-
- if( readDataToMem((char *)&newHeader.first, sizeof(unsigned long)) == sizeof(unsigned long) && inFile.is_open() ) {
- newHeader.second = malloc(headersize);
-
- if( readDataToMem((char *)newHeader.second, headersize) == headersize && inFile.is_open() ) {
- headerStore.push_back(newHeader);
- return HEADER_READOK;
- }
- else {
- if(log) *log << "CCACHE: Could not read heade-data! Closing dat-file: " << openFileDesc.filename << endl << flush;
- inFile.close();
- return HEADER_READERR;
- }
- }
- else {
- if(log) *log << "CCACHE: Could not read headerid-hash! Closing dat-file: " << openFileDesc.filename << endl << flush;
- inFile.close();
- return HEADER_READERR;
- }
- }
- else {
- if(log) *log << "CCACHE: Could not read header size. Closing dat-file: " << openFileDesc.filename << endl << flush;
- inFile.close();
- return HEADER_READERR;
- }
-}
-
-bool configcache::readAllHeaders()
-{
- int readHeaderStatus;
-
- deleteHeaderStore();
-
- do {
- readHeaderStatus = readHeader();
- }
- while ( readHeaderStatus == HEADER_READOK );
-
- if ( readHeaderStatus == HEADER_READLAST ) return true;
- else if ( readHeaderStatus == HEADER_READERR ) return false;
-}
-
void * configcache::getHeader(const string& headerid) {
- for (vector< pair<unsigned long, void *> >::iterator headerStoreIt = headerStore.begin(); headerStoreIt != headerStore.end(); ++headerStoreIt)
- if ( headerStoreIt->first == hash(headerid) )
- return headerStoreIt->second;
-
- return NULL;
+ return dataReader->getHeader(headerid);
}
-/* returns number of equilibration-steps left with new read configuration
- or zero if no new configuration was read */
-void configcache::readConfig(bool& readnewconfig, int& nequileft, vector<unsigned long> *excludeFileHashes)
+void configcache::readConfig(bool *readnewconfig, int *nequileft, vector<unsigned long> *excludeFileHashes)
{
- readnewconfig = false;
+ *readnewconfig = false;
- if(DATADIR == "" || MODE == CACHE_MODE_DISABLED) return;
+ if( DATADIR == "" || !(MODE==CACHE_MODE_RO||MODE==CACHE_MODE_RW) ) return;
if(refetchDataFiles){
refetchDataFiles = false;
vector<infiledesc>::iterator inFileIt = getNextInfile(excludeFileHashes);
int iDidVirtualSkips;
- if( (!inFile.is_open()) && inFileIt == inFiles.end() ) {
- cout << "RETURNING..." << endl;
- nequileft = nequileft_internal;
+ if( (!dataReader->fisopen()) && inFileIt == inFiles.end() ) {
+ if (*readnewconfig)
+ *nequileft = nequileft_internal;
return;
}
- while( (!inFile.is_open()) && inFiles.size() > 0 ) {
+ while( (!dataReader->fisopen()) && inFiles.size() > 0 ) {
+ string inFileParaString;
+
openFileDesc = *inFileIt;
+ if (openFileDesc.nequi < NEQUI)
+ doVirtualEquilibration = true;
+ else
+ doVirtualEquilibration = false;
+
+ firstUsedConfig = true;
+
if(log) *log << "CCACHE: Opening dat-file: " << inFileIt->filename << endl << flush;
- inFile.open( (DATADIR + "/" + inFileIt->filename).c_str(), std::ios::binary );
-
+
+ dataReader->openFile( DATADIR + "/" + inFileIt->filename );
+
+ if( openFileDesc.superextended ) {
+ if( dataReader->getParaString() != paraString() ) {
+ if(log) *log << "CCACHE: Parastring does not match. Closing dat-file..." << endl << flush;
+ dataReader->closeFile();
+ }
+ }
+
inFiles.erase(inFileIt);
- if( !inFile.is_open() ) continue;
-
- inBuffer = new boost::iostreams::filtering_istreambuf;
- inBuffer->push( boost::iostreams::bzip2_decompressor() );
- inBuffer->push(inFile);
+ if( !dataReader->fisopen() ) continue;
}
- if( inFile.is_open() )
+ if( dataReader->fisopen() )
{
- if (openFileDesc.doVirtualEquilibration) {
+ if (doVirtualEquilibration) {
if(log) *log << "CCACHE: Trying virtual equilibration." << endl << flush;
- openFileDesc.doVirtualEquilibration = false;
+ doVirtualEquilibration = false;
for (iDidVirtualSkips=0; iDidVirtualSkips < (NEQUI-openFileDesc.nequi)/openFileDesc.nskip; iDidVirtualSkips++) {
- if( readFullBlock(tmpConfig, configSize) != configSize || ! inFile.is_open() )
+ if( dataReader->readFullBlock(tmpConfig) < 0 )
break;
else if ( (NEQUI-openFileDesc.nequi) - (iDidVirtualSkips+1)*openFileDesc.nskip < nequileft_internal ) {
memcpy(configMem, tmpConfig, configSize);
nequileft_internal = NEQUI - openFileDesc.nequi - (iDidVirtualSkips+1)*openFileDesc.nskip;
- cout << "blabla:" << nequileft_internal << endl;
- readnewconfig = true;
- openFileDesc.firstUsedConfig = false;
+ *readnewconfig = true;
+ firstUsedConfig = false;
}
}
}
- if( readFullBlock(tmpConfig, configSize) == configSize && inFile.is_open() )
+ if( dataReader->readFullBlock(tmpConfig) >= 0 )
{
memcpy(configMem, tmpConfig, configSize);
- readnewconfig = true;
- if (openFileDesc.firstUsedConfig) {
- openFileDesc.firstUsedConfig = false;
- if (NEQUI < openFileDesc.nequi)
+ *readnewconfig = true;
+ if (firstUsedConfig) {
+ firstUsedConfig = false;
+ if (openFileDesc.nequi < NEQUI)
nequileft_internal = NEQUI - openFileDesc.nequi - iDidVirtualSkips*openFileDesc.nskip;
else
nequileft_internal = NEQUI - openFileDesc.nequi;
}
nequileft_internal -= openFileDesc.nskip;
- cout << "sadasd:" << nequileft_internal << endl;
- nequileft = nequileft_internal;
+ *nequileft = nequileft_internal;
return;
}
- else {
- if(log) *log << "CCACHE: Could not read configuration. Closing dat-file: " << openFileDesc.filename << endl << flush;
- inFile.close();
- }
}
}
}
void configcache::openOutFile(int actnequi)
-{
+{
time_t secstamp = time(NULL);
+ int iseq=0;
+
+ while (true) {
+ outFileName.str("");
+ outFileName << DATADIR << "/" << secstamp << "." << iseq << "_" << getFileId(actnequi, true, false) << "_.sdat.tmp";
- outFileName.str("");
- outFileName << DATADIR << "/" << secstamp << "_" << getFileId(actnequi) << "_.edat.tmp";
+ int tmpfd = open(outFileName.str().c_str(), O_CREAT | O_EXCL, 0644);
+ if ( tmpfd != -1 ) {
+ close(tmpfd);
+ break;
+ }
+ else if ( errno != EEXIST ) {
+ if(log) *log << "CCACHE: Could not create cachefile!" << endl << flush;
+ exit(1);
+ }
+
+ iseq++;
+ }
+
outFile.open( outFileName.str().c_str(), std::ios::binary );
- outBuffer = new boost::iostreams::filtering_ostreambuf;
- outBuffer->push(boost::iostreams::bzip2_compressor());
- outBuffer->push(outFile);
+ outFile << paraString() << endl;
+
+ ioBuffers->out = new boost::iostreams::filtering_ostreambuf;
+ ioBuffers->out->push(boost::iostreams::bzip2_compressor());
+ ioBuffers->out->push(outFile);
}
void configcache::writeHeader(const string& headerid, const char *header, long unsigned int size, int actnequi) {
unsigned long headeridhash;
- if( DATADIR == "" || MODE < 2 ) return;
+ if( DATADIR == "" || !(MODE==CACHE_MODE_WO||MODE==CACHE_MODE_RW) ) return;
if(!outFile.is_open())
openOutFile(actnequi);
headeridhash = hash(headerid);
- boost::iostreams::write(*outBuffer, (char*)&size, sizeof(long unsigned int));
- boost::iostreams::write(*outBuffer, (char*)&headeridhash, sizeof(unsigned long));
- boost::iostreams::write(*outBuffer, header, size);
+ boost::iostreams::write(*ioBuffers->out, (char*)&size, sizeof(long unsigned int));
+ boost::iostreams::write(*ioBuffers->out, (char*)&headeridhash, sizeof(unsigned long));
+ boost::iostreams::write(*ioBuffers->out, header, size);
}
void configcache::writeConfig(int actnequi)
{
long unsigned int zeroheader=0;
- if ( DATADIR == "" || MODE < 2 ) return;
+ if ( DATADIR == "" || !(MODE==CACHE_MODE_WO||MODE==CACHE_MODE_RW) ) return;
if ( ! outFile.is_open() )
openOutFile(actnequi);
- boost::iostreams::write(*outBuffer, (char*)&zeroheader, sizeof(long unsigned int));
+ boost::iostreams::write(*ioBuffers->out, (char*)&zeroheader, sizeof(long unsigned int));
- boost::iostreams::write(*outBuffer, configMem, configSize);
+ boost::iostreams::write(*ioBuffers->out, configMem, configSize);
}
void configcache::addPara(const string& parid, const double& val){
void configcache::setPara(const string& parid, const double& value){
Paras[getParIndex(parid)].val = value;
+
finishOutFile();
- if(inBuffer != NULL) { delete inBuffer; inBuffer=NULL; }
- inFile.close();
+ dataReader->closeFile();
inFiles.clear();
refetchDataFiles = true;
+ nequileft_internal = NEQUI;
}
configcache::~configcache()
{
finishOutFile();
- delete inBuffer;
- inBuffer = NULL;
+ delete dataReader;
}
void configcache::finishOutFile()
{
- if( outBuffer != NULL )
+ if( ioBuffers->out != NULL )
{
- delete outBuffer;
- outBuffer = NULL;
+ delete ioBuffers->out;
+ ioBuffers->out = NULL;
}
if( outFile.is_open() )
}
}
-int configcache::readFullBlock(char *tmpData, long unsigned int dataSize)
-{
- /* try to read header */
- if ( openFileDesc.extended )
- if ( ! readAllHeaders() )
- return -1;
-
- /* read data */
- return readDataToMem(tmpData, dataSize);
-}
-
-int configcache::readDataToMem(char *tmpData, long unsigned int dataSize)
-{
- int readturn = -1;
-
- if ( dataSize == 0 ) return 0;
-
- try { readturn = boost::iostreams::read(*inBuffer, tmpData, dataSize); }
- catch(boost::iostreams::bzip2_error& error) {
- if(log) *log << "CCACHE: Caught bzip2 exception with error code: " << error.error() << endl << flush;
- inFile.close();
- }
- catch (std::exception const& ex) {
- if(log) *log << "CCACHE: Caught exception: " << ex.what() << endl << flush;
- inFile.close();
- }
- catch( ... ) {
- if(log) *log << "CCACHE: Caught unknown exception while reading." << endl << flush;
- inFile.close();
- }
-
- return readturn;
-}
-
unsigned long configcache::hash(const string& str)
{
unsigned long hash = 5381;
return hash;
}
-void configcache::deleteHeaderStore()
-{
- while ( headerStore.size() > 0 ) {
- free(headerStore.back().second);
- headerStore.pop_back();
- }
-}
-
vector<infiledesc>::iterator configcache::getNextInfile(vector<unsigned long> *excludeFileHashes) {
for (vector<infiledesc>::iterator init = inFiles.begin(); init != inFiles.end(); ++init) {
if (excludeFileHashes != NULL) {
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